Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015825730.1_cds_XP_016502423.1_16066
CDS Infomation

[gene=LOC107820622] [db_xref=GeneID:107820622] [protein=abscisic acid 8'-hydroxylase 4-like] [protein_id=XP_016502423.1] [location=join(9096..9301,9400..9724,9931..10080,10222..10470,10815..10904,11002..11080,11599..11705,11815..11933,12477..12588)] [gbkey=CDS]
Sequence

ATGGAGAATAATATTGCTTGTTCCATTATTTACTTCCTTCTCTTTCTTCTCACAGCTCTA
CTCTTTTACATTTCAAAGAAACAAATATGGAAAGACATACAAAAAGCAAAGCTGCCTCCT
GGTTCGATGGGCTGGCCGTACATAGGGGAAACTCTCCAACTCTACTCTCAAGACCCAAAT
GTCTTCTTTGCTAACAAACAAAAAAGGTATGGTAATATATTCAAAACGCACATTCTTGGG
TACCCTTGTGTTATGCTTGCTAGTCCTGAAGCTGCCAGATTCGTGCTTGTAACTAACGCT
CACTTGTTCAAACCAACTTACCCCAAGAGCAAAGAGAAGTTGATTGGCCATTCTGCTTTG
TTCTTTCACCAAGGAAACTACCATTCTCAACTAAGGAAACTAACTCAGAGCTCGTTATCT
CCTGAAGCTCTTCGTAAAATAGTTCACGATATTGAGGCCTTGGTCATTTCTTCCTTGGAA
TCATGGTCGCAAAATAACCAAGTCATCAATACATTCCGTCTGTTGAAGAAGTTCTCCTTT
GAAGTTGGCATTCTTGCTATATTTGGTCAGCTGGATGCTAAGTACAAAGAGGAGCTTAAC
AAGAACTATTCCATAGTAGAAAAGGGCTATAATTCTTTCCCTACGAACTTGCGGGGGACT
GCTTATTACAAAGCTATGGTGGCGAGGAGGAAGCTTAATCAGATACTTAGCGAAATAATC
TTTGAAAGGAAGGAGAAAAAAACAGTAGAGAAAGATATGTTGGGTAATCTATTGAATTTC
AAAGATAAGAAAGGGCAGACGTTAACTGAAGGGCAAATTGCCGATAATGTCATCGGAGTA
CTCTTTGCTGCCCAGGACACAACAGCTAGTGCTTTGACATGGATTCTCAAGTACCTCTAC
GATGACCAGAAACTTTTAGAAGCTGTTAAGGCAGAACAAAGAGCAATTTACGAATCAAAT
GAAGAAGGAAATAAGCCATTGACATGGGCTCAAACAAGAAATATGTCACTAACTTACAGG
GTCATTTTAGAGAGCTTAAGGATGTCCAGCATTATATCTTTCACCTTTAGAGAAGCTGTG
GTTGATGTAGAATACGACGGTTACTTGATTCGAAAAGGTTGGAAAGTCATGCCACTATTC
AGAAACATTCATCACAATCCAGAATTTTTTGCTGACCCTCGGAATTTTGATGCTTCCAGA
TTTAAGGTTGCTCCCAAACCCAATACCTATATGCCATTTGGCAATGGTGCCCATGCTTGT
CCAGGAAATGAACTTGCCAAATTGGAGATGCTGATTCTCATTCATCATTTGGTTACCAAA
TTTAGGTGGGAAGTCGTAGCTTCCAGAGGAGCGGTACAATATAGCCCATTCCCCATACCT
GAGAATGGACTTCCATCTAGGTTCTGGAAGGAAACAAGAAGCCTAACAGATCCCTAG

Peptide Sequence

PEP ID

XP_016502423.1
PEP Infomation

PREDICTED: abscisic acid 8'-hydroxylase 4-like [Nicotiana tabacum]
Sequence

MENNIACSIIYFLLFLLTALLFYISKKQIWKDIQKAKLPPGSMGWPYIGETLQLYSQDPN
VFFANKQKRYGNIFKTHILGYPCVMLASPEAARFVLVTNAHLFKPTYPKSKEKLIGHSAL
FFHQGNYHSQLRKLTQSSLSPEALRKIVHDIEALVISSLESWSQNNQVINTFRLLKKFSF
EVGILAIFGQLDAKYKEELNKNYSIVEKGYNSFPTNLRGTAYYKAMVARRKLNQILSEII
FERKEKKTVEKDMLGNLLNFKDKKGQTLTEGQIADNVIGVLFAAQDTTASALTWILKYLY
DDQKLLEAVKAEQRAIYESNEEGNKPLTWAQTRNMSLTYRVILESLRMSSIISFTFREAV
VDVEYDGYLIRKGWKVMPLFRNIHHNPEFFADPRNFDASRFKVAPKPNTYMPFGNGAHAC
PGNELAKLEMLILIHHLVTKFRWEVVASRGAVQYSPFPIPENGLPSRFWKETRSLTDP

Transcript Sequence

Gene sequence data has not been registered.